Exporting a Dataset – Rhino Health

Export your dataset to your Rhino Client

Imported datasets in Rhino FCP can be exported to the Rhino client by following these steps:

Go to `your project` > datasets > `dataset to export`
Click `Export Dataset` and type the desired folder to export, e.g.,
```
/rhino_data/export_folder
```

Structure of your exported dataset

Your exported dataset will be structured similarly to how datasets are structured for code run inputs and outputs. In particular, your dataset will have a directory structure that resembles:

.
|___ dataset.csv
|___ metadata.json
|___ dicom_data/
|______ ...
|___ file_data/
|______ ...

Inside this directory, you will find some (or all) of the following elements:

dataset.csv - a comma-separated value file with the tabular data from your dataset
metadata.json - a json containing information about the dataset (e.g., which workgroup it belonged to, when it was created)
dicom_data/ - a directory containing any DICOM files associated with your dataset
file_data/ - a directory containing any generic files associated with your dataset (e.g., jpegs)

Metadata Structure

The metadata.json file contains the following key-value pairs:

dataset_uid: str
dataset_name: str
dataset_version: int
data_schema_uid: str
data_schema_name: str
workgroup_uid: str
workgroup_name: str
creation_time: str
num_rows: int
num_fields: int
fields: List[str]

See an example below:

{
  "dataset_uid": "a186342e-7a0d-46cd-819d-b751f361108d",
  "dataset_name": "Clinic Dataset",
  "dataset_version": 0,
  "data_schema_uid": "51ee196b-f978-4ca9-9583-6c0309bc3a4a",
  "data_schema_name": "Diabetes Schema",
  "workgroup_uid": "5a2eee3b-dbf2-492d-93fa-1175ae2ad7a9",
  "workgroup_name": "Clinic",
  "creation_time": "2022-09-28 11:51:57.070000+00:00",
  "num_rows": 275,
  "num_fields": 10,
  "fields": [
    "Pregnancies",
    "Age",
    "Height",
    "Weight",
    "Glucose",
    "BloodPressure",
    "SkinThickness",
    "Insulin",
    "DiabetesPedigreeFunction",
    "Outcome"
  ]
}

Access to your exported dataset

Once exported, the exported dataset can be accessed by:

SFTP

Log into the client via SFTP and run the following command.

sftp> get export_folder

Need more help? See How can I import data in my local environment onto my Rhino Health client using SFTP?

AWS S3, GCP Cloud Storage, SMB

Find your files (see above) in your cloud or external storage.

Need more help? See How to import data from my cloud storage (AWS S3, GCP GS)?